Fitness data for PP_1944 in Pseudomonas putida KT2440

putative Aminomethyltransferase
SEED: Similar to vanillate/3-O-methylgallate O-demethylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -3.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -2.7 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.6 compare
carbon source Oleic (C) -0.3 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -1.8 compare
phage P. put PUT 10 MOI 10 +0.3 +2.2 compare
nitrogen source no extra (N); with MOPS +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.2 compare
phage P. putida compost MOI 0.1 +0.3 +2.7 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.4 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source DL-2-Aminoadipic 10 mM (C) +0.5 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.9 compare
phage P. putida South MOI 10 +0.6 +3.2 compare
phage P. putida PUT 7 MOI 1 +0.6 +3.7 compare
phage P. putida Missley MOI 0.1 +1.1 +5.7 compare