Fitness data for PP_1897 in Pseudomonas putida KT2440

DNA internalization-related competence protein ComEC/Rec2
SEED: DNA internalization-related competence protein ComEC/Rec2
KEGG: competence protein ComEC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Valeric (C) -0.7 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.2 compare
carbon source 1,3-Butandiol (C) -0.5 -2.2 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.7 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.6 compare
carbon source L-Lysine 10 mM (C) -0.4 -2.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.4 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.1 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -1.8 compare
carbon source D-Lysine 10 mM (C) -0.4 -2.1 compare
temperature Growth at 30C; with MOPS -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.5 compare
carbon source ferulate (C); with MOPS +0.4 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.3 compare