Fitness data for PP_1890 in Pseudomonas putida KT2440

Type 1 pili chaperone protein FimC
SEED: P pilus assembly protein, chaperone PapD
KEGG: fimbrial chaperone protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.9 -1.6 compare
no stress control Growth with no stress -0.6 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.3 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.9 compare
carbon source D-Glucose (C) -0.5 -1.6 compare
pH Growth at pH7 and (C) Trisodium citrate -0.5 -1.7 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.5 -1.4 compare
carbon source D-Glucose (C); with MOPS -0.4 -1.4 compare
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement -0.4 -1.7 compare
carbon source L-Leucine (C) +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5 +2.4 compare
phage P. putida Sci Big MOI 0.1 +0.5 +1.8 compare
phage PUT 8 MOI 1 +0.5 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.7 compare
phage PUT8 MOI 10 +0.6 +2.6 compare
phage PUT8 MOI 0.1 +0.7 +2.6 compare