Fitness data for PP_1888 in Pseudomonas putida KT2440

Fimbrial protein
SEED: fimbrial protein, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -0.8 -2.9 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.5 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.4 -2.1 compare
temperature Growth at 30C; with MOPS -0.4 -2.0 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.4 -2.0 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -2.0 compare
carbon source Crotonic (C) -0.4 -2.0 compare
nitrogen source Propiolactam (N) -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.3 compare
pH Growth at pH8 and (C) D-Glucose +0.4 +2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.0 compare
carbon source L-Leucine (C) +0.4 +1.8 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.4 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.0 compare