Fitness data for PP_1887 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: YD repeat protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 -1.3 compare
nitrogen source Ammonium chloride and TNT (N) -0.1 -1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.1 +1.2 compare
phage PUT8 MOI 10 +0.1 +1.2 compare
carbon source 2,3-Butanediol (C) +0.1 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.1 +1.1 compare
pH Growth at pH6 and (C) Trisodium citrate +0.1 +1.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +1.2 compare
phage P. putida Sci Big MOI 0.1 +0.1 +1.1 compare
pH Growth at pH6 and (C) Trisodium citrate +0.1 +1.2 compare
phage P. putida Sci small MOI 0.1 +0.2 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.2 compare
carbon source Valeric (C) +0.2 +1.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.2 +1.4 compare
carbon source ferulate (C); with MOPS +0.2 +1.5 compare
carbon source Valerolactone (C) +0.2 +1.7 compare
carbon source Tween 20 (C) +0.2 +1.7 compare
phage P. putida South MOI 10 +0.2 +1.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +2.0 compare