Fitness data for PP_1877 in Pseudomonas putida KT2440

free methionine-(R)-sulfoxide reductase
SEED: Free methionine-(R)-sulfoxide reductase, contains GAF domain
KEGG: GAF domain-containing protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.3 compare
nitrogen source no extra (N); with MOPS -0.6 -3.3 compare
pH pH 7 -0.6 -2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.6 -2.4 compare
pH pH 8 -0.5 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.4 -1.9 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.4 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.7 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4 -1.8 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -0.4 -2.3 compare
carbon source Myristic (C) +0.4 +1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.4 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +1.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +2.7 compare