Fitness data for PP_1875 in Pseudomonas putida KT2440

Sensor histidine kinase/response regulator
SEED: sensor histidine kinase/response regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -0.8 -3.0 compare
pH Valerolactone (C) pH 6.5 -0.8 -3.6 compare
pH Valerolactone (C) pH 6.5 -0.7 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.0 compare
carbon source 3-Hydroxydecanoic (C) -0.5 -2.7 compare
temperature Growth at 30C +0.5 +3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +3.7 compare
nitrogen source DL-2-Aminobutyric (N) +0.6 +4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +3.9 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.8 +5.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.4 compare
pH pH 4 +0.9 +4.1 compare
pH pH 5 +0.9 +4.8 compare
carbon source Delta-Dodecalactone (C) +1.1 +7.8 compare
carbon source Delta-Dodecalactone (C) +1.1 +8.4 compare
carbon source Delta-Undecalactone (C) +1.5 +10.0 compare
carbon source Delta-Decalactone (C) +1.5 +9.0 compare
carbon source Delta-Undecalactone (C) +1.5 +9.9 compare
carbon source Delta-Decalactone (C) +1.6 +10.0 compare