Fitness data for PP_1855 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: FIG00957049: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.6 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -2.9 compare
phage P. putida Sci small MOI 0.1 -1.5 -1.3 compare
carbon source butyrate (C) -1.2 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.2 compare
stress R2A with Fusaric 240 ug/mL -1.0 -2.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.0 -2.0 compare
nitrogen source no extra (N) -0.9 -2.4 compare
temperature shift Temperature shift 30_to_25 -0.8 -1.6 compare
carbon source Valeric (C) -0.8 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8 +2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.8 +2.8 compare
nitrogen source nitrate (N) +0.9 +1.8 compare
carbon source Tween 20 (C) +1.0 +4.1 compare
carbon source ferulate (C); with MOPS +1.0 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.2 +3.7 compare
carbon source Valeric (C) +1.2 +4.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.1 compare