Fitness data for PP_1834 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FOG: Ankyrin repeat

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -2.0 -1.8 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.5 -2.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.1 -2.4 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.1 -2.2 compare
nitrogen source NAG (N) -1.1 -3.5 compare
nitrogen source nitrate (N) -1.0 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -1.0 -2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.0 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.1 compare
phage P. putida Missley MOI 0.1 -1.0 -1.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.2 compare
nitrogen source nitrogen source nitrate 5mM -0.9 -1.6 compare
toxin pUC18_phdP1_pSU18T_docP1 +1.0 +3.1 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +1.0 +2.5 compare
carbon source Nonanoic (C) +1.1 +3.5 compare
nitrogen source NAG (N); with MOPS +1.1 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.3 compare