Fitness data for PP_1833 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00958237: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
pH Growth at pH9 and (C) Trisodium citrate -1.7 -2.3 compare
pH Growth at pH9 and (C) Trisodium citrate -1.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.2 -2.8 compare
nitrogen source Hippuric (N) -1.1 -2.7 compare
carbon source 4-Methyl-2-oxopentanoic (C) -1.1 -2.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.0 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.0 compare
nitrogen source nitrogen source nitrite 0.5mM -0.9 -2.1 compare
carbon source D-Glucose (C); with MOPS -0.9 -1.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.8 -2.5 compare
phage P. putida PUT 7 MOI 1 -0.8 -1.0 compare
stress Growth with Chloride 500 mM; with MOPS -0.8 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.5 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.8 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +4.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.9 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.9 +3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +1.1 +4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.1 +2.1 compare