Fitness data for PP_1829 in Pseudomonas putida KT2440

Hydrolase, alpha/beta fold family
SEED: Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -4.5 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -4.0 -2.3 compare
stress Growth with Chloride 200 mM -2.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.6 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -1.8 compare
no stress control Growth with no stress -2.0 -3.2 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.8 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.8 -1.0 compare
carbon source Mucic (C) -1.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.7 -2.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -1.6 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 -1.6 compare
carbon source D-Glucose (C); with MOPS -1.6 -1.7 compare
nitrogen source 2,6-diaminopimelic (N) -1.6 -1.2 compare
carbon source ferulate (C); with MOPS -1.6 -1.6 compare
phage P. putida Sci small MOI 0.1 -1.5 -1.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -1.4 compare
stress R2A with Fusaric 480 ug/mL -1.4 -3.1 compare
nitrogen source no extra (N); with MOPS -1.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.4 +1.7 compare