Fitness data for PP_1827 in Pseudomonas putida KT2440

N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
SEED: Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p
KEGG: putative adenine-specific DNA-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -2.0 -7.3 compare
nitrogen source Propandiamine (N) -1.7 -3.0 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.7 -6.4 compare
phage P. putida Sci small MOI 0.1 -1.3 -2.6 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.1 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -3.3 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.0 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.5 compare
nitrogen source Propandiamine (N) -0.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.1 compare
nitrogen source nitrogen source nitrite 0.5mM +0.8 +2.9 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +2.2 compare
stress R2A with Fusaric 480 ug/mL +0.9 +4.1 compare
carbon source L-Leucine (C) +1.1 +3.8 compare
nitrogen source DL-2-Aminobutyric (N) +1.1 +6.7 compare
nitrogen source DL-2-Aminobutyric (N) +1.5 +9.1 compare