Fitness data for PP_1813 in Pseudomonas putida KT2440

ComEA-related protein
SEED: Competence protein ComEA helix-hairpin-helix region precursor
KEGG: competence protein ComEA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source Urea (N); with MOPS -2.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.7 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -2.6 compare
pH Growth at pH9 and (C) Trisodium citrate -1.4 -2.3 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -1.3 -2.4 compare
carbon source L-Lysine (C) -1.2 -3.1 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -1.2 -2.6 compare
phage P. putida PUT10 MOI 0.1 -1.1 -3.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -1.0 -2.5 compare
carbon source butyrate (C) -0.9 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.6 compare
phage PUT8 MOI 0.1 -0.9 -3.1 compare
pH Growth at pH7 and (C) D-Glucose +0.9 +2.0 compare
temperature Growth at 30C; with MOPS +0.9 +2.2 compare
temperature shift Temperature shift 30_to_25 +0.9 +2.1 compare
carbon source carbon source Bisabolol 45 mM +0.9 +2.7 compare
no stress control Growth with no stress +1.0 +1.6 compare
carbon source D-Glucose (C) +1.0 +3.0 compare
pH pH 6 +1.1 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +1.9 compare