Fitness data for PP_1806 in Pseudomonas putida KT2440

putative arabinose 5-phosphate isomerase
SEED: Arabinose 5-phosphate isomerase (EC 5.3.1.13)
KEGG: arabinose-5-phosphate isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -3.3 compare
phage P. putida South MOI 1 -0.7 -3.1 compare
carbon source D-Glucose (C) -0.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -1.7 compare
no stress control Growth with no stress -0.6 -1.7 compare
phage P. put South MOI 10 -0.5 -1.6 compare
carbon source ferulate (C); with MOPS -0.5 -1.7 compare
carbon source D-Glucose (C) -0.5 -2.1 compare
phage P. putida PUT10 MOI 1 -0.5 -2.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.9 compare
nitrogen source nitrogen source nitrate 5mM +0.6 +2.8 compare
nitrogen source nitrogen source nitrite 0.5mM +0.7 +2.6 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.7 +2.7 compare
pH Growth at pH6 and (C) Trisodium citrate +0.7 +1.9 compare
pH pH 5 +0.7 +2.7 compare
carbon source carbon source Bisabolene 48.9 mM +0.7 +3.0 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.7 +2.5 compare