Fitness data for PP_1794 in Pseudomonas putida KT2440

conserved hypothetical protein
SEED: Large exoproteins involved in heme utilization or adhesion

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.4 -2.4 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.4 -2.8 compare
carbon source 5-Hydroxydodecanoate (C) -0.4 -2.9 compare
no stress control Growth with no stress -0.4 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.6 compare
carbon source Levulinic Acid (C) -0.4 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +2.1 compare
micoeukaryotes C.elegans, mixed culture-2 +0.4 +2.3 compare
micoeukaryotes C.elegans, mixed culture-1 +0.4 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.9 compare
stress R2A with Fusaric 480 ug/mL +0.5 +3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +3.2 compare
phage P. putida South MOI 10 +0.8 +5.7 compare
phage P. putida South MOI 10 +0.9 +5.4 compare
phage P. put South MOI 10 +1.0 +5.8 compare