Fitness data for PP_1766 in Pseudomonas putida KT2440

methylthioribose-1-phosphate isomerase
SEED: Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)
KEGG: methylthioribose-1-phosphate isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D-Glucose (C) -1.4 -2.6 compare
carbon source Levulinic Acid (C) -1.2 -4.1 compare
phage P. putida Sci small MOI 0.1 -1.2 -1.7 compare
phage P. putida Sci small MOI 0.1 -1.2 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.7 compare
carbon source Levulinic Acid (C) -1.1 -5.1 compare
carbon source Myristic (C) -1.1 -2.5 compare
nitrogen source nitrite (N) -0.9 -1.7 compare
carbon source 5-Hydroxydodecanoate (C) -0.9 -2.8 compare
carbon source Levulinic Acid (C) -0.9 -4.6 compare
carbon source L-Valine (C) -0.9 -4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -1.6 compare
pH pH 5 -0.9 -2.2 compare
phage PUT8 MOI 0.1 -0.8 -2.1 compare
phage P. putida South MOI 10 -0.8 -1.6 compare
pH Growth at pH8 and (C) D-Glucose +0.8 +3.5 compare
carbon source ferulate (C); with MOPS +0.8 +1.6 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.9 +1.9 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +2.5 compare