Fitness data for PP_1744 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.4 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -2.3 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -1.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.9 -2.3 compare
nitrogen source D-2-Aminobutyric (N) -0.9 -1.3 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.8 -3.2 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.8 -2.8 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.7 -1.5 compare
nitrogen source nitrate (N) -0.7 -1.5 compare
no phage control Time6-nophage -0.7 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7 -2.0 compare
carbon source ferulate (C); with MOPS -0.7 -1.5 compare
stress R2A with Fusaric 240 ug/mL -0.7 -2.3 compare
pH D-Glucose (C) pH 6.5 -0.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.1 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.7 +3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.8 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.0 compare