Fitness data for PP_1739 in Pseudomonas putida KT2440

conserved membrane protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -7.3 -2.4 compare
phage P. putida South MOI 10 -1.9 -2.0 compare
carbon source acetate (C) -1.7 -2.1 compare
carbon source ferulate (C); with MOPS -1.6 -1.9 compare
microaerobic m9 microaerobic M9 -1.5 -2.9 compare
pH pH 9 -1.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -2.2 compare
stress R2A with Fusaric 120 ug/mL -1.5 -3.1 compare
pH Growth at pH7 and (C) Trisodium citrate -1.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4 -1.5 compare
nitrogen source NAG (N); with MOPS -1.4 -1.7 compare
temperature shift Temperature shift 10_to_21; with MOPS -1.4 -2.4 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -1.3 -1.4 compare
phage P. put South MOI 10 -1.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -1.8 compare
pH Growth at pH9 and (C) Trisodium citrate -1.2 -1.5 compare
pH Growth at pH9 and (C) D-Glucose -1.2 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +1.3 +3.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.7 +1.7 compare