Fitness data for PP_1729 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00953060: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -4.2 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -3.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.2 -1.9 compare
temperature shift Temperature shift 30_to_34; with MOPS -2.7 -2.2 compare
pH Growth at pH8 and (C) D-Glucose -2.5 -1.4 compare
carbon source L-Alanine (C) -2.4 -2.2 compare
carbon source butyrate (C) -2.2 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -2.2 -1.2 compare
no phage control Time6-nophage -2.0 -2.3 compare
carbon source D-Glucose (C); with MOPS -1.9 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.9 -1.5 compare
carbon source 4-Aminobutyric 10 mM (C) -1.9 -1.3 compare
nitrogen source 2,6-diaminopimelic (N) -1.8 -0.7 compare
carbon source Ethyl decanoate (C) -1.8 -1.3 compare
stress Butanol 0.6 vol% +1.8 +2.7 compare
stress 3-methyl-1-butanol 0.4 vol% +1.8 +2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.9 +2.9 compare
stress 3-methyl-3-butenol (pure) 0.25 vol% +2.0 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.9 +1.7 compare