Fitness data for PP_1727 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: 2-aminoethylphosphonate uptake and metabolism regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.7 -2.8 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.8 compare
carbon source Crotonic (C) -0.6 -2.6 compare
carbon source Delta-Nonalactone (C) -0.6 -2.3 compare
carbon source carbon source D-Glucose 55.5 mM -0.6 -2.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.5 -2.7 compare
carbon source Tween 20 (C) -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
temperature shift Temperature shift 10_to_21 -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.3 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.5 +2.7 compare
carbon source Soil Extract with D-Glucose 10 mM; 15C +0.5 +3.6 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.6 compare