Fitness data for PP_1711 in Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH pH 4 -0.6 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -3.1 compare
carbon source carbon source Glycerol 108.6 mM -0.5 -2.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.4 -2.2 compare
pH pH 6 -0.4 -1.8 compare
carbon source L-Leucine (C) -0.4 -1.9 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.7 compare
nitrogen source Ammonium chloride (N) -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
pH Valerolactone (C) pH 6.5 -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +2.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.3 compare