Fitness data for PP_1697 in Pseudomonas putida KT2440

transcriptional regulator, GntR family
SEED: Putative alkanesulfonate metabolism utilization regulator
KEGG: GntR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -3.3 -1.4 compare
nitrogen source D-2-Aminobutyric (N) -3.0 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.8 -2.3 compare
pH Growth at pH7 and (C) Trisodium citrate -2.4 -1.5 compare
carbon source ferulate (C); with MOPS -2.2 -2.3 compare
carbon source Rhamnogalacturonan - from potato (C) -1.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -2.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.5 -1.9 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.4 -1.4 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.4 -1.5 compare
nitrogen source nitrate (N) -1.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.4 -1.9 compare
nitrogen source Imidazole (N) -1.3 -3.5 compare
pH Growth at pH9 and (C) Trisodium citrate -1.3 -2.1 compare
phage P. putida Sci small MOI 0.1 -1.3 -1.0 compare
phage P. putida PUT10 MOI 1 -1.3 -3.4 compare
no stress control Growth with no stress -1.2 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.4 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +3.5 compare