Fitness data for PP_1694 in Pseudomonas putida KT2440

DNA recombination limiting inversions protein
SEED: DNA recombination protein RmuC
KEGG: DNA recombination protein RmuC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.1 -2.5 compare
nitrogen source NAG (N); with MOPS -0.9 -1.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -0.8 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.0 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.8 -1.3 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.8 -3.5 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -1.7 compare
stress R2A with Fusaric 240 ug/mL -0.7 -2.3 compare
pH pH 9 -0.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.5 compare
carbon source L-Phenylalanine 5 mM (C) -0.6 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.6 +2.6 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.6 +2.7 compare
carbon source Nonanoic (C) +0.7 +2.4 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.8 +3.2 compare