Fitness data for PP_1684 in Pseudomonas putida KT2440

putative Transporter
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.9 -2.0 compare
nitrogen source nitrate (N) -0.8 -2.5 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -1.8 compare
carbon source Valerolactone (C) -0.6 -2.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.5 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -1.6 compare
carbon source Myristic (C) -0.6 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.6 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
carbon source carbon source Glycerol 108.6 mM +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM +0.6 +2.5 compare
nitrogen source nitrate (N) +0.6 +2.7 compare
pH pH 8 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +1.8 compare
pH pH 4 +0.7 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +2.8 compare