Fitness data for PP_1661 in Pseudomonas putida KT2440

putative Dehydrogenase subunit
SEED: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.4 -1.7 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4 -3.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.4 -2.0 compare
nitrogen source Propandiamine (N) -0.4 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -2.2 compare
nitrogen source NAG (N); with MOPS +0.3 +1.5 compare
pH Valerolactone (C) pH 6.5 +0.4 +1.8 compare
carbon source Valerolactone (C) +0.4 +2.2 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.4 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +2.1 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.4 +2.7 compare
carbon source carbon source D-Glucose 55.5 mM +0.4 +2.0 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.5 +2.9 compare
no stress control Growth with no stress +0.5 +3.0 compare