Fitness data for PP_1644 in Pseudomonas putida KT2440

NAD(P)H dehydrogenase (quinone)
SEED: Flavoprotein WrbA
KEGG: Trp repressor binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D-Glucose (C); with MOPS -2.4 -2.5 compare
carbon source L-Leucine (C) -1.5 -2.9 compare
phage P. putida Sci Big MOI 0.1 -1.5 -2.8 compare
stress Geraniol 1 vol% -1.4 -4.3 compare
pH pH 8 -1.3 -2.1 compare
nitrogen source NAG (N); with MOPS -1.2 -1.8 compare
nitrogen source 2,6-diaminopimelic (N) -1.2 -2.5 compare
carbon source 3-Hydroxydecanoic (C) -1.2 -2.4 compare
carbon source carbon source Bisabolol 45 mM -1.2 -4.2 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.2 -3.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM -1.2 -2.4 compare
carbon source carbon source D-Glucose 55.5 mM -1.1 -1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -1.0 -3.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.9 -3.4 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.9 -2.3 compare
pH pH 9 -0.9 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -3.3 compare
carbon source Delta-Dodecalactone (C) -0.8 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.9 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.9 +2.5 compare