Fitness data for PP_1641 in Pseudomonas putida KT2440

tRNA 2-thiocytidine biosynthesis protein TtcA
SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source Propandiamine (N) -1.4 -5.3 compare
nitrogen source Propandiamine (N) -1.3 -6.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.2 -4.2 compare
micoeukaryotes C.elegans, mixed culture-1 -1.1 -5.4 compare
micoeukaryotes C.elegans, mixed culture-2 -0.8 -3.7 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.7 -3.1 compare
nitrogen source spermidine (N) -0.4 -3.3 compare
carbon source ferulate (C); with MOPS +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.2 compare
nitrogen source NAG (N); with MOPS +0.4 +1.4 compare
carbon source carbon source Bisabolene 48.9 mM +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.7 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.4 +2.1 compare
nitrogen source DL-2-Aminobutyric (N) +0.4 +2.8 compare
carbon source ferulate (C); with MOPS +0.4 +1.9 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.4 +2.2 compare
carbon source 3-methyl-1-butanol (C) +0.5 +3.5 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose +0.5 +3.5 compare
phage PUT 8 MOI 1 +0.6 +2.5 compare
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter +0.7 +5.1 compare