Fitness data for PP_1619 in Pseudomonas putida KT2440

tRNA pseudouridine synthase D
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
KEGG: tRNA pseudouridine synthase D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.1 -2.1 compare
phage PUT8 MOI 0.1 -0.9 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -2.1 compare
phage P. putida PUT10 MOI 10 -0.8 -3.2 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -2.7 compare
carbon source D-Fructose (C) -0.7 -2.8 compare
carbon source Tween 20 (C) -0.7 -1.8 compare
carbon source D-Lysine 10 mM (C) -0.7 -2.8 compare
carbon source Ferulic Acid (C) -0.6 -2.5 compare
temperature shift Temperature shift 30_to_34 -0.6 -2.4 compare
nitrogen source Ammonium chloride (N) -0.6 -1.8 compare
nitrogen source no extra (N); with MOPS -0.6 -1.6 compare
carbon source ferulate (C); with MOPS -0.6 -1.2 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.0 compare
pH pH 6 -0.6 -1.5 compare
temperature Growth at 30C; with MOPS -0.6 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +1.8 compare
carbon source acetate (C) +0.8 +2.1 compare
nitrogen source nitrogen source nitrite 0.5mM +1.0 +3.0 compare