Fitness data for PP_1605 in Pseudomonas putida KT2440

Ribonuclease HII
SEED: Ribonuclease HII (EC 3.1.26.4)
KEGG: ribonuclease HII

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
carbon source acetate (C) -4.6 -3.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.9 -3.5 compare
nitrogen source NAG (N); with MOPS -2.1 -2.1 compare
micoeukaryotes C.elegans, mixed culture-1 -2.0 -3.0 compare
stress R2A with Fusaric 240 ug/mL -2.0 -1.8 compare
phage P. putida Sci small MOI 0.1 -1.9 -1.2 compare
phage P. putida PUT 7 MOI 1 -1.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.5 -2.2 compare
micoeukaryotes C.elegans, mixed culture-2 -1.4 -2.5 compare
nitrogen source D-2-Aminobutyric (N) -1.4 -0.9 compare
temperature shift Temperature shift 10_to_21; with MOPS -1.4 -2.6 compare
nitrogen source no extra (N); with MOPS -1.4 -2.0 compare
pH pH 7 -1.3 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.3 -1.6 compare
pH Growth at pH7 and (C) D-Glucose -1.3 -1.3 compare
nitrogen source Propiolactam (N) -1.2 -1.4 compare
stress Growth with Chloride 200 mM; with MOPS +1.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.4 compare
pH Valerolactone (C) pH 6.5 +1.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.7 compare