Fitness data for PP_1571 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00959132: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
temperature shift Temperature shift 10_to_30; with MOPS -2.4 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.4 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.0 -2.3 compare
pH D-Glucose (C) pH 6 -2.0 -2.4 compare
nitrogen source Propiolactam (N) -1.8 -2.5 compare
phage P. putida Missley MOI 0.1 -1.6 -1.8 compare
pH Growth at pH8 and (C) D-Glucose -1.5 -1.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.5 -2.8 compare
pH Valerolactone (C) pH 6.5 -1.5 -1.7 compare
carbon source Valerolactam 10 mM (C) -1.4 -2.1 compare
nitrogen source nitrite (N) -1.4 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.3 -1.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.4 +1.6 compare
carbon source Myristic (C) +1.4 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +1.5 +3.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +1.6 +3.5 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +1.6 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +1.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.8 +1.9 compare