Fitness data for PP_1558 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: antitermination protein Q, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -1.0 -3.0 compare
stress Growth with Chloride 200 mM; with MOPS -0.8 -2.7 compare
stress R2A with Fusaric 120 ug/mL -0.7 -2.8 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.6 compare
stress R2A with Fusaric 240 ug/mL -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -1.7 compare
phage P. putida South MOI 10 -0.5 -1.2 compare
nitrogen source Propiolactam (N) +0.5 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +1.7 compare
carbon source D-Glucose; D-Xylose; p-Coumaric; benzoic acid (C) +0.6 +4.1 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +2.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.6 +3.6 compare
carbon source L-Leucine (C) +0.6 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.6 +3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.7 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.9 compare