Fitness data for PP_1554 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source Trisodium citrate (C) -2.1 -2.6 compare
phage P. putida South MOI 10 -1.8 -1.5 compare
carbon source D-Glucose (C) -1.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.7 -2.3 compare
no stress control Growth with no stress -1.7 -2.7 compare
carbon source carbon source D-Glucose 55.5 mM -1.7 -2.9 compare
carbon source propionate (C) -1.6 -4.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.5 -2.5 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -1.5 -2.2 compare
temperature shift Temperature shift 10_to_30 -1.4 -2.9 compare
nitrogen source nitrogen source nitrite 0.5mM -1.4 -2.3 compare
nitrogen source nitrogen source nitrite 0.5mM -1.2 -2.3 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.2 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.2 -2.8 compare
carbon source Crotonic (C) -1.1 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +1.2 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +1.0 compare
carbon source acetate (C) +1.3 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.5 +4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.7 +1.4 compare