Fitness data for PP_1546 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.9 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.0 -2.6 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.7 compare
carbon source Trisodium citrate 10 mM (C) -0.9 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.4 compare
nitrogen source NAG (N); with MOPS -0.7 -0.9 compare
temperature shift Temperature shift 10_to_21 -0.7 -2.5 compare
pH pH 5 +0.7 +1.4 compare
temperature Growth at 25C +0.8 +2.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.8 +1.7 compare
carbon source Lauric (C) +0.8 +2.1 compare
pH pH 8 +0.8 +2.5 compare
carbon source carbon source Glycerol 108.6 mM +0.8 +2.2 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.9 +1.9 compare
carbon source D-Glucose (C) 2.5 mM +1.0 +3.1 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +1.0 +3.1 compare
carbon source Myristic (C) +1.2 +4.0 compare