Fitness data for PP_1542 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -3.1 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.7 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.4 compare
temperature Growth at 30C; with MOPS -0.7 -2.1 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.9 compare
nitrogen source nitrate (N) -0.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.4 compare
no phage control Time6-nophage -0.5 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.6 compare
phage moi 100 Time6-phageFRS -0.5 -2.5 compare
carbon source L-Leucine (C) +0.5 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.2 compare
carbon source Lauric (C) +0.5 +2.6 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +2.2 compare
phage P. putida PUT 7 MOI 1 +0.7 +2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.5 compare
pH Growth at pH9 and (C) Trisodium citrate +0.7 +2.5 compare