Fitness data for PP_1541 in Pseudomonas putida KT2440

putative Methyltransferase
SEED: DNA-cytosine methyltransferase (EC 2.1.1.37)
KEGG: DNA (cytosine-5-)-methyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
temperature shift Temperature shift 10_to_25; with MOPS -1.0 -3.0 compare
nitrogen source nitrate (N) -0.7 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.1 compare
carbon source acetate (C) -0.6 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.6 compare
carbon source L-Leucine (C) -0.5 -1.3 compare
pH pH 8 +0.6 +2.0 compare
carbon source 1,3-Butandiol (C) +0.6 +2.4 compare
carbon source L-Lysine (C) +0.6 +2.6 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.6 +2.8 compare
micoeukaryotes C.elegans, mixed culture-2 +0.6 +2.5 compare
carbon source ferulate (C); with MOPS +0.8 +2.7 compare
phage P. putida Sci Big MOI 0.1 +0.8 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.1 compare