Fitness data for PP_1539 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.4 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -2.4 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.3 +2.3 compare
carbon source L-Proline (C) +0.3 +2.4 compare
temperature shift Temperature shift 10_to_21; with MOPS +0.3 +2.1 compare
carbon source Trisodium citrate 10 mM (C) +0.3 +2.4 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +1.6 compare
nitrogen source Urea (N); with MOPS +0.4 +1.9 compare
phage PUT8 MOI 0.1 +0.4 +2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.0 compare
carbon source 1,3-Butandiol (C) +0.4 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +2.3 compare
carbon source L-Lysine (C) +0.4 +2.5 compare
carbon source Hexanoic (C) +0.5 +3.4 compare
carbon source pyruvate (C) +0.5 +3.2 compare
carbon source L-Leucine (C) +0.5 +2.9 compare
carbon source Myristic (C) +0.5 +2.8 compare
carbon source D-Glucose (C) 2.5 mM +0.5 +3.9 compare
carbon source Lauric (C) +0.7 +4.6 compare
carbon source Valeric (C) +0.9 +4.8 compare