Fitness data for PP_1533 in Pseudomonas putida KT2440

putative Excisionase
SEED: excisionase, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.0 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -2.0 compare
stress R2A with Fusaric 240 ug/mL -0.5 -1.7 compare
carbon source Tween 20 (C) -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.5 -1.5 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -1.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.2 compare
nitrogen source NAG (N); with MOPS +0.4 +1.4 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.4 +2.1 compare
carbon source Glucose (C) (40mM) +0.4 +2.5 compare
phage PUT 8 MOI 1 +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.9 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.3 compare