Fitness data for PP_1532 in Pseudomonas putida KT2440

putative Phage integrase
SEED: site-specific recombinase, phage integrase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -3.4 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -3.3 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.6 -2.6 compare
phage PUT8 MOI 10 -0.6 -3.1 compare
pH pH 9 -0.6 -2.8 compare
supernatant Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x -0.6 -2.9 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.5 -2.4 compare
carbon source carbon source Bisabolene 48.9 mM -0.5 -2.7 compare
carbon source carbon source Bisabolol 45 mM -0.5 -2.5 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.5 -2.1 compare
carbon source Glycerol (C) -0.5 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.6 compare
carbon source Octanoic (C) -0.5 -2.5 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.4 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -1.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.4 -1.7 compare
pH Growth at pH8 and (C) D-Glucose +0.4 +1.7 compare
pH Growth at pH8 and (C) Trisodium citrate +0.4 +1.8 compare
nitrogen source nitrogen source nitrite 0.5mM +0.4 +1.9 compare
carbon source L-Leucine (C) +0.5 +1.7 compare