Fitness data for PP_1529 in Pseudomonas putida KT2440

Probable cysteine desulfurase
SEED: Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA
KEGG: cysteine sulfinate desulfinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.9 -3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.8 -1.5 compare
carbon source L-Leucine (C) -0.8 -2.9 compare
no stress control Growth with no stress -0.8 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.9 compare
pH Growth at pH6 and (C) Trisodium citrate +0.7 +2.6 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.8 +2.8 compare
phage P. putida PUT10 MOI 10 +0.8 +4.2 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +1.8 compare
phage P. putida South MOI 0.1 +0.8 +3.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.8 +2.5 compare
carbon source carbon source Glycerol 108.6 mM +0.8 +3.1 compare
stress Growth with Chloride 200 mM +0.9 +3.8 compare
carbon source Delta-Nonalactone (C) +1.0 +4.0 compare
carbon source ferulate (C); with MOPS +1.0 +2.6 compare