Fitness data for PP_1513 in Pseudomonas putida KT2440

Ribosomal RNA small subunit methyltransferase J
SEED: SAM-dependent methyltransferase (EC 2.1.1.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -7.1 -2.4 compare
carbon source Trisodium citrate 10 mM (C) -3.2 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.3 -1.3 compare
phage P. putida South MOI 0.1 -2.0 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 -1.7 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.7 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -1.6 -1.4 compare
phage P. put PUT 10 MOI 10 -1.6 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.6 -1.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.5 -2.5 compare
phage P. put PUT 10 MOI 0.1 -1.5 -2.2 compare
nitrogen source nitrogen source Ammonium chloride 20mM -1.5 -1.2 compare
phage P. putida Sci small MOI 0.1 -1.4 -1.0 compare
carbon source L-Phenylalanine 5 mM (C) -1.4 -2.4 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -1.3 -2.1 compare
nitrogen source nitrogen source nitrate 5mM -1.3 -2.8 compare
nitrogen source 6-aminocaproic (N) +1.3 +2.8 compare
pH Growth at pH8 and (C) Trisodium citrate +1.3 +3.6 compare
stress Growth with Chloride 200 mM +1.5 +4.8 compare