Fitness data for PP_1477 in Pseudomonas putida KT2440

ssDNA-specific exonuclease RecJ
SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
KEGG: single-stranded-DNA-specific exonuclease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Valerolactone (C) -0.9 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.3 compare
pH Growth at pH7 and (C) Trisodium citrate -0.8 -1.8 compare
carbon source 4-Aminobutyric 10 mM (C) -0.8 -2.6 compare
nitrogen source Urea (N) -0.8 -2.4 compare
carbon source Tween 20 (C) -0.7 -1.7 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.7 -2.1 compare
nitrogen source Urea (N) -0.7 -2.0 compare
carbon source Myristic (C) -0.7 -1.7 compare
carbon source 1,3-Butandiol (C) -0.6 -2.7 compare
phage PUT8 MOI 0.1 -0.6 -3.3 compare
temperature shift Temperature shift 10_to_30 -0.6 -2.3 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.6 -2.0 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.5 compare
temperature Growth at 25C +0.6 +2.5 compare
carbon source acetate (C) +0.6 +1.6 compare
nitrogen source nitrogen source nitrite 0.5mM +0.6 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.9 +3.1 compare