Fitness data for PP_1411 in Pseudomonas putida KT2440

GGDEF domain protein
SEED: GGDEF domain protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Geraniol 1 vol% -0.5 -3.5 compare
stress Formaldehyde 0.03125 vol% -0.4 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.4 -2.7 compare
pH Growth at pH7 and (C) Trisodium citrate -0.3 -1.9 compare
phage P. put South MOI 0.1 -0.3 -2.5 compare
stress Cholinium glutamate 10 vol% -0.3 -2.3 compare
no stress control Growth with no stress -0.3 -1.7 compare
phage P. putida South MOI 0.1 -0.3 -1.9 compare
micoeukaryotes C.elegans, mixed culture-1 -0.3 -1.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.3 -1.9 compare
stress Growth with Chloride 500 mM +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.3 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.3 +1.9 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +3.1 compare