Fitness data for PP_1404 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG126011: Hypothetical protein
KEGG: putative membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -3.5 -2.8 compare
carbon source D-Glucose (C) -2.1 -2.6 compare
phage P. putida Sci small MOI 0.1 -1.9 -1.2 compare
carbon source Trisodium citrate (C) -1.9 -2.4 compare
nitrogen source NAG (N); with MOPS -1.7 -1.4 compare
pH Valerolactone (C) pH 6.5 -1.7 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.6 -2.3 compare
carbon source Hexanoic (C) -1.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.4 -1.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.3 -1.2 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -1.3 -2.2 compare
micoeukaryotes C.elegans, mixed culture-2 -1.3 -2.3 compare
pH Growth at pH7 and (C) D-Glucose -1.3 -0.8 compare
carbon source Valeric (C) -1.2 -1.8 compare
carbon source L-Phenylalanine 5 mM (C) -1.2 -1.5 compare
carbon source Ethyl decanoate and D-Glucose (C)s -1.1 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.1 compare