Fitness data for PP_1349 in Pseudomonas putida KT2440

ATP:cob(I)alamin adenosyltransferase
SEED: ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
KEGG: cob(I)alamin adenosyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source Ethanolamine (N) -2.3 -7.5 compare
nitrogen source Ethanolamine (N) -2.1 -5.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.5 -4.0 compare
pH Valerolactone (C) pH 6.5 -1.4 -2.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM -1.0 -2.7 compare
pH pH 8 -0.9 -2.3 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.9 -3.4 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.9 -2.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.9 -1.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.8 -2.5 compare
carbon source ferulate (C); with MOPS -0.8 -2.1 compare
carbon source Delta-Decalactone (C) -0.7 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.6 compare
phage P. put South MOI 10 -0.7 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +1.5 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.7 +2.5 compare
phage P. putida South MOI 1 +0.7 +2.9 compare
stress Growth with Chloride 200 mM; with MOPS +0.9 +4.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +2.7 compare