Fitness data for PP_1289 in Pseudomonas putida KT2440

conserved protein of unknown function, DUF328 family
SEED: UPF0246 protein YaaA
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 3-methyl-1-butanol (C) -0.7 -4.2 compare
phage P. put South MOI 10 -0.6 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.5 -2.0 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -2.0 compare
carbon source Valeric (C) -0.5 -1.3 compare
phage PUT 8 MOI 1 -0.5 -1.6 compare
carbon source 3-methyl-1-butanol (C) -0.5 -3.1 compare
pH pH 5 -0.5 -1.2 compare
nitrogen source Hippuric (N) -0.4 -1.8 compare
phage moi 100 Time6-phageFRS -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.9 compare