Fitness data for PP_1288 in Pseudomonas putida KT2440

GDP-mannose 6-dehydrogenase
SEED: GDP-mannose 6-dehydrogenase (EC 1.1.1.132)
KEGG: GDP-mannose 6-dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.8 compare
pH Growth at pH8 and (C) D-Glucose -0.6 -2.1 compare
temperature Growth at 30C; with MOPS -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -2.3 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.6 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -1.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -1.8 compare
nitrogen source NAG (N) -0.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.4 -2.4 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.4 -2.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -2.1 compare
micoeukaryotes C.elegans, mixed culture-1 -0.3 -1.8 compare
nitrogen source Ammonium chloride (N) -0.3 -1.5 compare
carbon source Delta-Decalactone (C) +0.3 +2.0 compare
carbon source L-Leucine (C) +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.6 compare