Fitness data for PP_1284 in Pseudomonas putida KT2440

Alginate production protein AlgE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
no stress control Growth with no stress -0.8 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.9 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.6 compare
phage PUT 8 MOI 1 -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.9 compare
carbon source ferulate (C); with MOPS -0.5 -1.6 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.1 compare
r2a control R2A control -0.4 -2.3 compare
carbon source Tween 20 (C) -0.4 -1.7 compare
carbon source Tween 20 (C) +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
pH D-Glucose (C) pH 6 +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.5 +2.5 compare
nitrogen source NAG (N); with MOPS +0.5 +1.9 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.5 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.6 +2.7 compare
pH Growth at pH7 and (C) D-Glucose +0.7 +2.2 compare