Fitness data for PP_1282 in Pseudomonas putida KT2440

Alginate biosynthesis protein AlgX
SEED: Alginate biosynthesis protein AlgX

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH9 and (C) Trisodium citrate -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.8 compare
no stress control Growth with no stress -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.7 compare
phage P. put South MOI 1 -0.4 -2.2 compare
nitrogen source Propandiamine (N) -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.5 compare
carbon source Valeric (C) -0.4 -1.4 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.4 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare