Fitness data for PP_1281 in Pseudomonas putida KT2440

Alginate lyase
SEED: Alginate lyase precursor (EC 4.2.2.3)
KEGG: poly(beta-D-mannuronate) lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida PUT10 MOI 10 -0.9 -4.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.8 compare
phage P. put PUT 10 MOI 10 -0.8 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.6 compare
phage P. putida South MOI 1 -0.8 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -2.3 compare
phage P. put PUT 10 MOI 1 -0.7 -4.1 compare
phage P. put PUT 10 MOI 1 -0.7 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -4.0 compare
phage P. putida PUT10 MOI 0.1 -0.6 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -3.5 compare
phage P. put PUT 10 MOI 10 -0.5 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.6 compare
phage P. putida PUT10 MOI 1 -0.5 -2.8 compare
phage P. putida PUT10 MOI 0.1 -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -3.0 compare
phage P. putida PUT10 MOI 1 -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -2.6 compare
pH pH 9 +0.5 +2.2 compare
pH pH 4 +0.5 +2.7 compare