Fitness data for PP_1274 in Pseudomonas putida KT2440

Oxidoreductase, short-chain dehydrogenase/reductase family
SEED: Oxidoreductase, short chain dehydrogenase/reductase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 50 mM -1.1 -3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.3 compare
pH pH 7 -0.8 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.6 -2.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6 -1.9 compare
nitrogen source no extra (N); with MOPS -0.6 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.2 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.5 -2.2 compare
pH D-Glucose (C) pH 6.5 +0.5 +2.5 compare
carbon source Tween 20 (C) +0.5 +1.6 compare
temperature Growth at 30C +0.6 +2.8 compare
nitrogen source Urea (N) +0.6 +2.0 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +1.7 compare
temperature shift Temperature shift 30_to_10 +0.7 +3.1 compare
nitrogen source nitrogen source nitrite 1mM +0.8 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +3.1 compare